Structure Database (LMSD)

Common Name
Amphotericin B
Systematic Name
Synonyms
LM ID
LMPK06000002
Formula
Exact Mass
Calculate m/z
923.487854
Status
Curated


Classification

Category
Main Class
Sub Class

Biological Context

Amphotericin B is a classic antifungal polyene macrolide that has been used in the treatment of systemic fungal infections, primarily caused by C. albicans, A. fumigatus, and parasitic L. protozoans, as well as in tissue culture to prevent fungi from contaminating cell cultures.1,2,3 Amphotericin B binds with ergosterol, the main component of fungal cell membranes, forming a transmembrane channel that results in altered plasma membrane permeability and leakage of vital cytoplasmic components, such as K+, ultimately inducing cell death.4 Because prolonged use of amphotericin B is associated with infusion-related events and nephrotoxicity, lipid-based formulations have been devised for more favorable clinical relevance.1,2

This information has been provided by Cayman Chemical

References

2. Radomski, N., Cambau, E., Moulin, L., et al. Comparison of culture methods for isolation of nontuberculous mycobacteria from surface waters. Appl. Environ. Microbiol. 76(11), 3514-3520 (2010).
3. Ogita, A., Fujita, K.i., and Tanaka, T. Enhancing effects on vacuole-targeting fungicidal activity of amphotericin B. Front. Microbiol. 3, 100 (2012).
4. Miceli, M.H., and Chandrasekar, P. Safety and efficacy of liposomal amphotericinB for the empirical therapy of invasive fungalinfections in immunocompromised patients. Infect. Drug. Resist. 5, 9-16 (2012).

String Representations

InChiKey (Click to copy)
APKFDSVGJQXUKY-INPOYWNPSA-N
InChi (Click to copy)
InChI=1S/C47H73NO17/c1-27-17-15-13-11-9-7-5-6-8-10-12-14-16-18-34(64-46-44(58)41(48)43(57)30(4)63-46)24-38-40(45(59)60)37(54)26-47(61,65-38)25-33(51)22-36(53)35(52)20-19-31(49)21-32(50)23-39(55)62-29(3)28(2)42(27)56/h5-18,27-38,40-44,46,49-54,56-58,61H,19-26,48H2,1-4H3,(H,59,60)/b6-5+,9-7+,10-8+,13-11+,14-12+,17-15+,18-16+/t27-,28-,29-,30+,31+,32+,33-,34-,35+,36+,37-,38-,40+,41-,42+,43+,44-,46-,47+/m0/s1
SMILES (Click to copy)
[C@]12([H])C[C@H](C=CC=CC=CC=CC=CC=CC=C[C@@H]([C@@H](O)[C@@H](C)[C@H](C)OC(=O)C[C@H](O)C[C@H](O)CC[C@@H](O)[C@H](O)C[C@H](O)C[C@@](C[C@H](O)[C@H]1C(=O)O)(O)O2)C)O[C@@H]1O[C@@H]([C@@H](O)[C@H](N)[C@@H]1O)C

Other Databases

Wikipedia
KEGG ID
HMDB ID
CHEBI ID
PubChem CID
Cayman ID

Calculated Physicochemical Properties

Heavy Atoms 65
Rings 3
Aromatic Rings 0
Rotatable Bonds 3
Van der Waals Molecular Volume 921.25
Topological Polar Surface Area 325.82
Hydrogen Bond Donors 12
Hydrogen Bond Acceptors 17
logP 5.29
Molar Refractivity 245.18

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Updated at
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